Wheaton Ecogeomorphology & Topographic Analysis Lab @ Fluvial Habitats Center
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        • Martha Jensen
        • Ryan Lokteff
        • Connor Penrod
        • Rebecca Rossi
        • Sonya Welsh
      • Research Scientists >
        • Sara Bangen
        • James Hensleigh
        • Natalie Kramer
        • Pete McHugh
        • Elijah Portugal
        • Carl Saunders
        • Eric Wall
        • Gary O'Brien
      • Post-Docs >
        • Nicole Czarnomski
      • Technicians >
        • Micael Albonico
        • Braden Anderson
        • Adan Banda
        • Jordan Burningham
        • Kenny Demeurichy
        • Taylor Dudunake
        • Martha Jensen
        • Joshua Gilbert
        • Jordan Gilbert
        • Thomas Hafen
        • Landon Haycock
        • Matt Meier
        • Chris Smith
        • Geoff Stevens
      • Visiting Scholars >
        • Ester Ramos
  • FHC Projects
    • Current Projects >
      • Beaver Dam Censusing
      • Birch Creek Restoration
      • Escalante Watershed
      • BRAT 2018-2019 >
        • BRAT-Yakama
        • BRAT-John Day
        • BRAT-NF Burnt River
        • BRAT-Idaho
        • BRAT-Utah
        • BRAT-TNC
        • BRAT-GYA
        • Survey123
      • ELR: Asotin LWD Restoration and IMW
      • Price River Channel Analysis
    • Past Projects >
      • BLM >
        • BLM: Historic Sand Cliff Signatures Public Archeology Program
      • DOE: ICRRR >
        • DOE/ICRRR: Geomorphic Change Detection 4.0 Software Development
        • DOE/ICRRR: Geomorphic Change Detection in the Grand Canyon
        • DOE/ICRRR: MoRPHED PhD Studentship
      • Idaho Power Company >
        • Idaho Power: TLS Data Analysis
      • ELR >
        • ELR/BPA: CHaMP Grand Ronde Crew Variability Study
        • ELR/BPA: ISEMP Lemhi Topographic Survey Technique Intercomparison
        • ELR/BPA: ISEMP Bridge Creek Restoration & IMW
        • ELR/FHC/CTWS: Pine Creek Beaver Assisted Restoration Pilot Project
      • NSF >
        • NSF: zCloudTools: Making Point Clouds Useful for Earth Science
        • NSF: Sensitivity of Braided River Morphodynamics to Sediment Supply
      • UDWR >
        • UDWR: Beaver Restoration Assessment Tool (BRAT)
      • USFS >
        • USFS Classification of Columbia River Basin Riparian Vegetation
        • USFS: Comparison of Traditional Versus Ground-Based LiDaR Instream Haibtat Assessments
        • USFS: Temple Fork Watershed Fish & Beaver Ecology
      • USGS >
        • USGS: Big Rivers Monitoring Protocol Development
        • USGS: Dynamism and Persistence of Eddy Sand Bars in Grand Canyon
        • USGS: Riparian Vegetation Analysis
        • USGS: Support in Geographic and Geomorphic Information Analysis for the Colorado River in Grand Canyon
      • Other Sponsors (one off) >
        • BPA/SFR: Development of CHaMP Transformation Tool
        • GCT: Pilot Study: Testing the Beaver Restoration Assessment Tool (BRAT)
        • NOAA: Linking Fisheries,
        • NPS: Assessment of Indicator Sites
        • USU: Tracking Ecogeomorphic Dynamics in Beaver Dam Complexes
    • Study Site Pages >
      • Bridge Creek >
        • 2009 BDSS Structures
        • Bridge Creek April 2010 Drone Survey
      • River Feshie >
        • The River Feshie Catchment
        • Our Research
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  • Resources
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        • Markdown
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      • GIS Help >
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        • GIS Data Sources >
          • Connecting To The APFO Services
          • Connecting to the Utah AGRC Discover Imagery and Base Map Server
          • High Resolution Imagery for Utah State
      • How to Use Specific Software >
        • Adobe Illustrator >
          • Making GCD Figures for ET-AL Lab Using ArcGIS & Adobe Illustrator
        • ArcGIS Desktop - ArcMap >
          • GIS Tutorials
          • Creating DEMs, TINs and Terrains
          • How to divide polylines into a specified segment length
          • Simple Change Detection in ArcGIS
          • Working with Styles in ArcGIS
          • Fixing ActiveX Warning in ArcGIS 10.5
        • Box >
          • Migrating to Box Drive from Box Sync
        • EndNote >
          • EndNote X4 Basics
        • FastStone Capture
        • GitHub >
          • Make a GitHub Account
        • Picasa >
          • Geotagging images & making albums
        • Word >
          • Saving Word Documents as PDFs
          • Using Styles Effectively in Manuscripts & Reports
        • Zotero >
          • Adding from Browser
          • Cite-While-you-Write >
            • Citing in Google Docs
            • Cite in Word
      • Reccomended Software & Utilities
      • Surveying & Geomatics >
        • rtkGPS
      • Writing Resources >
        • Writing Literature Reviews (for Grads)
        • Writing Scientific Papers
        • Uploading Content to Research Gate
    • Lab Members Only >
      • Internal Resources >
        • When you First Start
        • Standard Software Suite
        • Lab Software License
        • Virtual Computing
        • Editing Workshop Flyers & Webpages
        • Travel
        • Vignettes
      • Internal FHC Announcements
      • FHC Workshops
      • ETAL Projects on Box
      • ETAL Non Project on Box
    • River Links >
      • Classification Schemes >
        • Eco-Geo-Hydro Mess
      • Free Literature
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  • Joe Wheaton

New FHC, ET-AL or ELR Publications

Low-Tech Restoration making a difference if you can measure it from space!

9/3/2018

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Together with Nick Silverman and a team of researchers from University of Montana, NRCS's Sage Grouse Initiative in this paper we show that low-tech, process based restoration can make a measurable difference in productivity of mesic habitats (i.e. wet meadows).  Using three iconic restoration projects as examples:
  • Gunnison, CO - Zeedyk Structures
  • Bridge Creek, OR - Beaver Dam Analogues
  • Maggie Creek, NV - Grazing Management & Beaver Recovery
We show not only can these cheaper and affordable restoration techniques achieve the desired results by affecting large areas, they can also be measured simply from space with satellite imagery. The calculations shown in the paper can be done by anyone, for mesic habitats in the Western US using SGI's Mapping Tools.
Do calculations yourself with SGI's Mapper
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Leveraging Google Earth Engine and SGI's Mesic Habitat Mapper, this paper shows three low-tech restoration projects that hit the system hard enough you could measure it from space with the blunt instrument of 30 m resolution satellite imagery (i.e. LANDSAT).
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  1. Silverman NL, Allred BW, Donnelly JP, Chapman TB, Maestas JD, Wheaton J, White J and Naugle DE. 2018. Low-tech riparian and wet meadow restoration increases vegetation productivity and resilience across semi-arid rangelands. Restoration Ecology. DOI: 10.1111/rec.12869.​
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Nahorniak et al. Paper on how to automate Delft Hydraulic modelling with AWS for 1000's of visits

9/3/2018

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In this paper, Matt Nahorniak lays out how we took advantage of open-source Delft3D to automate the process of computational mesh generation from high resolution topography for reaches. We automated this for the generation of hydraulic models for over 5000 site visits in the Columbia Habitat Monitoring Program (now defunded by BPA) and automated these simulations on Amazon Web Services (AWS EC2). While we are no longer running these simulations for CHaMP, all those model runs (and the 950+ sites from which they came) are publicly available and the source code is open source. This technique is a game changer for properly leveraging high resolution topography of rivers to realize the vision laid out in Wheaton et al. (2017).

All the source code is freely available through our Riverscapes Consortium repository: 
Source Code Repository
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  • Nahorniak M, Wheaton J, Volk C, Bailey P, Reimer M, Wall E, Whitehead K and Jordan C. 2018. How do we efficiently generate high-resolution hydraulic models at large numbers of riverine reaches? Computers & Geosciences. 119: 80-91. DOI: 10.1016/j.cageo.2018.07.001.
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RCAT - assessing riparian condition across the western US Paper published

9/3/2018

0 Comments

 
Wally Macfarlane led this effort to get vetted the rest of the Riparian Condition Assessment Tool (RCAT - A Riverscapes Consortium Model) peer-reviewed and disseminated. We had previously (Macfarlane et al. 2016) published a key component of the model - the riparian vegetation departure. This paper shows how that line of evidence can be combined with other lines of evidence to estimate and overall riparian condition for every reach of stream in a drainage network.  In this paper, we illustrate its application by adding floodplain accessibility and land use intensity as additional lines of evidence.
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  • Macfarlane WW, Gilbert JT, Gilbert JD, Saunders WC, Hough-Snee N, Hafen C, Wheaton JM and Bennett SN. 2018. What are the Conditions of Riparian Ecosystems? Identifying Impaired Floodplain Ecosystems across the Western U.S. Using the Riparian Condition Assessment (RCA) Tool. Environmental Management. DOI: 10.1007/s00267-018-1061-2.
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Fig 6 from paper showing examples of riparian condition assessment (RCA) outputs for watersheds across the Interior Columbia River Basin.
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Dan Hamill publishes his thesis research on side-scan sonar in Plos One

9/3/2018

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Dan Hamil did his Masters research on how to make Side-Scan SONAR into useful geospatial data for mapping bed roughness.  He employed Dan Buscombe's PyHum software.  PyHum is an open-source project dedicated to provide a generic Python framework for reading and exporting data from Humminbird(R) instruments, carrying out rudimentary radiometric corrections to the data, classify bed texture, and produce some maps on aerial photos and kml files for google-earth. This paper vets some of the methods behind doing that with a case study from the Grand Canyon. 

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  • Hamill D, Buscombe D and Wheaton JM. 2018. Alluvial substrate mapping by automated texture segmentation of recreational-grade side scan sonar imagery. PLOS ONE. 13(3): e0194373. DOI: 10.1371/journal.pone.0194373.
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  • Home
    • Fluvial Habitats Center
    • Wheaton et al (Lab)
    • Bouwes ELR Lab
    • News & Annoucements
    • New FHC Publications
    • FHC Location
    • FHC Factsheets & Posters
    • Contact
  • People
    • People in the Lab... Coming & Going
    • Graduate Students >
      • Lauren Herbine
      • Karen Bartelt
    • Research Staff >
      • Research Scientists >
        • Joe Wheaton
        • Nicolaas Bouwes
        • Wally Macfarlane
        • Stephen Bennett
      • Technicians >
        • Cashe Rasmussen
        • Chalese Hafen
        • Dylan Baum >
          • Brian Ferrara
    • Where are they now? >
      • Former Graduate Students >
        • Sara Bangen
        • Reid Camp
        • Florence Consolati
        • Daniel Hamill
        • Konrad Hafen
        • James Hensleigh
        • Nate Hough-Snee
        • Alan Kasprak
        • Martha Jensen
        • Ryan Lokteff
        • Connor Penrod
        • Rebecca Rossi
        • Sonya Welsh
      • Research Scientists >
        • Sara Bangen
        • James Hensleigh
        • Natalie Kramer
        • Pete McHugh
        • Elijah Portugal
        • Carl Saunders
        • Eric Wall
        • Gary O'Brien
      • Post-Docs >
        • Nicole Czarnomski
      • Technicians >
        • Micael Albonico
        • Braden Anderson
        • Adan Banda
        • Jordan Burningham
        • Kenny Demeurichy
        • Taylor Dudunake
        • Martha Jensen
        • Joshua Gilbert
        • Jordan Gilbert
        • Thomas Hafen
        • Landon Haycock
        • Matt Meier
        • Chris Smith
        • Geoff Stevens
      • Visiting Scholars >
        • Ester Ramos
  • FHC Projects
    • Current Projects >
      • Beaver Dam Censusing
      • Birch Creek Restoration
      • Escalante Watershed
      • BRAT 2018-2019 >
        • BRAT-Yakama
        • BRAT-John Day
        • BRAT-NF Burnt River
        • BRAT-Idaho
        • BRAT-Utah
        • BRAT-TNC
        • BRAT-GYA
        • Survey123
      • ELR: Asotin LWD Restoration and IMW
      • Price River Channel Analysis
    • Past Projects >
      • BLM >
        • BLM: Historic Sand Cliff Signatures Public Archeology Program
      • DOE: ICRRR >
        • DOE/ICRRR: Geomorphic Change Detection 4.0 Software Development
        • DOE/ICRRR: Geomorphic Change Detection in the Grand Canyon
        • DOE/ICRRR: MoRPHED PhD Studentship
      • Idaho Power Company >
        • Idaho Power: TLS Data Analysis
      • ELR >
        • ELR/BPA: CHaMP Grand Ronde Crew Variability Study
        • ELR/BPA: ISEMP Lemhi Topographic Survey Technique Intercomparison
        • ELR/BPA: ISEMP Bridge Creek Restoration & IMW
        • ELR/FHC/CTWS: Pine Creek Beaver Assisted Restoration Pilot Project
      • NSF >
        • NSF: zCloudTools: Making Point Clouds Useful for Earth Science
        • NSF: Sensitivity of Braided River Morphodynamics to Sediment Supply
      • UDWR >
        • UDWR: Beaver Restoration Assessment Tool (BRAT)
      • USFS >
        • USFS Classification of Columbia River Basin Riparian Vegetation
        • USFS: Comparison of Traditional Versus Ground-Based LiDaR Instream Haibtat Assessments
        • USFS: Temple Fork Watershed Fish & Beaver Ecology
      • USGS >
        • USGS: Big Rivers Monitoring Protocol Development
        • USGS: Dynamism and Persistence of Eddy Sand Bars in Grand Canyon
        • USGS: Riparian Vegetation Analysis
        • USGS: Support in Geographic and Geomorphic Information Analysis for the Colorado River in Grand Canyon
      • Other Sponsors (one off) >
        • BPA/SFR: Development of CHaMP Transformation Tool
        • GCT: Pilot Study: Testing the Beaver Restoration Assessment Tool (BRAT)
        • NOAA: Linking Fisheries,
        • NPS: Assessment of Indicator Sites
        • USU: Tracking Ecogeomorphic Dynamics in Beaver Dam Complexes
    • Study Site Pages >
      • Bridge Creek >
        • 2009 BDSS Structures
        • Bridge Creek April 2010 Drone Survey
      • River Feshie >
        • The River Feshie Catchment
        • Our Research
        • The Team
        • Posters, Papers, & More
        • Photo Gallery
  • Resources
    • ETAL Reading Group >
      • ETAL Reading Group Zotero Library
    • Courses & Workshops >
      • Courses & Workshops by Joe
    • Guides & Tips >
      • Figure Preparation Tutorials
      • Basic Computing Tips & Tricks >
        • Database & SQL Intro
        • Batch Unzip Script
        • Get a QR Code
        • GeoJSON
        • Markdown
        • Special Characters
        • USU VPN
      • GIS Help >
        • ArcGIS Education Edition
        • GIS Data Sources >
          • Connecting To The APFO Services
          • Connecting to the Utah AGRC Discover Imagery and Base Map Server
          • High Resolution Imagery for Utah State
      • How to Use Specific Software >
        • Adobe Illustrator >
          • Making GCD Figures for ET-AL Lab Using ArcGIS & Adobe Illustrator
        • ArcGIS Desktop - ArcMap >
          • GIS Tutorials
          • Creating DEMs, TINs and Terrains
          • How to divide polylines into a specified segment length
          • Simple Change Detection in ArcGIS
          • Working with Styles in ArcGIS
          • Fixing ActiveX Warning in ArcGIS 10.5
        • Box >
          • Migrating to Box Drive from Box Sync
        • EndNote >
          • EndNote X4 Basics
        • FastStone Capture
        • GitHub >
          • Make a GitHub Account
        • Picasa >
          • Geotagging images & making albums
        • Word >
          • Saving Word Documents as PDFs
          • Using Styles Effectively in Manuscripts & Reports
        • Zotero >
          • Adding from Browser
          • Cite-While-you-Write >
            • Citing in Google Docs
            • Cite in Word
      • Reccomended Software & Utilities
      • Surveying & Geomatics >
        • rtkGPS
      • Writing Resources >
        • Writing Literature Reviews (for Grads)
        • Writing Scientific Papers
        • Uploading Content to Research Gate
    • Lab Members Only >
      • Internal Resources >
        • When you First Start
        • Standard Software Suite
        • Lab Software License
        • Virtual Computing
        • Editing Workshop Flyers & Webpages
        • Travel
        • Vignettes
      • Internal FHC Announcements
      • FHC Workshops
      • ETAL Projects on Box
      • ETAL Non Project on Box
    • River Links >
      • Classification Schemes >
        • Eco-Geo-Hydro Mess
      • Free Literature
      • Rivers in the News
      • Videos & Galleries
  • Joe Wheaton